PUBLICATIONS
OF ROBERT J. BAKER
Includes: edited books (5), book reviews (8), and obituaries (5)
(For printable format click here)
1999
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268.
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Baker, R. J., J. A. DeWoody, A. J. Wright, and R. K. Chesser.
1999. On the utility of heteroplasmy in genotoxicity studies:
an example from Chornobyl. Ecotoxicology 8:301-309.
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267.
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Van Den Bussche, R., S. A Harmon, R. J. Baker, A. L. Bryan,
Jr., J. A. Rodgers, M. J. Harris and I. L. Brisbin, Jr. 1999.
Low levels of genetic variability in North American populations
of the wood stork (Mycteria americana). The Auk
116:1083-1092.
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266.
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Bradley, R. D. and R. J. Baker. 1999. Jones’s pocket
gopher Geomys knoxjonesi. Pp. 486-487 in The Smithsonian
Book of North American Mammals. (D. E. Wilson and S. Ruff,
eds). Smithsonian Institution Press, Washington D.C.
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265.
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Wright, A. J., R. A. Van Den Bussche, B. K. Lim, M. D. Engstrom
and R. J. Baker. 1999. Systematics of the genera Carollia and Rhinophylla based
on the cytochrome b gene. Journal of Mammalogy 80:1202-1213.
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264.
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Clary, M., D. M. Bell, C. W. Edwards, T. W. Jolley, O. Knyazhnitskiy,
N. Lewis-Oritt, S. J. Mantooth, L. L. Peppers, I. Teimann-Boege,
F. D. Yancey II, D. J. Howell, B. A. Locke, R. J. Baker and
R. D. Bradley. 1999. Checklist of mammals from twelve habitat
types at Fort Bliss Military Base; 1997-1998. Occasional
Papers of the Museum of Texas Tech University 192:i+1-16.
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263.
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Nekrutenko, A., K. D. Makova, R. K. Chesser, and R. J. Baker.
1999. Representational difference analysis to distinguish
cryptic species. Molecular Ecology 8:1235-1238.
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262.
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DeWoody, J. A., R. K. Chesser and R. J. Baker. 1999. A translocated
mitochondrial cytochrome b pseudogene in voles (Rodentia: Microtus).
Journal of Molecular Evolution 48:380-382.
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261.
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Baker, R. J., Makova K. D., and Chesser R. K. 1999. Microsatellites
indicate high frequency of multiple paternity in Apodemus (Rodentia).
Molecular Ecology 8:107-111.
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1998
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260.
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Van Den Bussche, R.A., R.J. Baker, J.P. Huelsenbeck and
D.M. Hillis. 1998. Base compositional bias and phylogenetic
analyses: a test of the “Flying DNA” Hypothesis.
Molecular Phylogenetics and Evolution 10:408-416.
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259.
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Baker, R. J., C. J. Phillips, R. D. Bradley, J. M. Burns,
D. Cooke, G. F. Edson, D. R. Haragan, C. Jones, R. R.
Monk, J. T. Montford, D. J. Schmidly, and N. C. Parker.
1998. Bioinformatics, museums and society: integrating
biological data for knowledge-based decisions. Occasional
Papers of the Museum of Texas Tech University 187:i+1-4.
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258.
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Parker, N. C., R. D. Bradley, J. M. Burns, G. F. Edson,
D. R. Haragan, C. Jones, R. R. Monk, J. T. Montford,
C. J. Phillips, D. J. Schmidly, and R. J. Baker. 1998.
Bioinformatics: A multidisciplinary approach for the
life sciences. Occasional Papers of the Museum of Texas
Tech University 186:i+1-8.
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257.
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Roots, E. H. and R. J. Baker. 1998. Rhogeessa genowaysi.
Mammalian Species 589:1-3.
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256.
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Nekrutenko, A., D. M. Hillis, J.C. Patton, R. D. Bradley
and R. J. Baker. 1998. Cytosolic isocitrate dehydrogenase
in humans, mice, and voles and phylogenetic analysis
of the enzyme family. Molecular Biology and Evolution
15:1674-1684.
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255.
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Bradley, R. D., T. W. Jolley, L. L. Peppers, H. R. Roberts,
E. Johnson, L. Pace, S. Angulo, D. Riskind and R. J.
Baker. 1998. Checklist of the recent vertebrate fauna
of the Lubbock Lake Landmark State Historical Park. Occasional
Papers of the Museum of Texas Tech University 184:1-7.
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254.
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Parker, N. C., R. J. Baker, R. D. Bradley, C. Jones,
R. R. Monk, D. J. Schmidly, R. W. Sims and F. D. Yancey
II. 1998. Texas Tech Museum and Texas GAP Program: a
partnership providing field data for GAP analysis. GAP
Analysis Bullentine No. 7, USGS-BRD Gap Analysis Program,
Moscow, Idaho.
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253.
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Van Den Bussche, R., J. Hudgeons, and R. J. Baker. 1998.
Phylogenetic accuracy, stability, and congruence: relationships
within and among the New World bat genera Artibeus, Dermanura,
and Koopmania. Pp. 59-71 in Bat Biology and
Conservation. (T. H. Kunz and P. A. Racey, eds.). Smithsonian
Institution Press. Washington.
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252.
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Baker, R. J. and T. L. Yates. 1998. Letter in response
to an editorial: Revolution in Evolution by J. Bull and
H. A. Wichman in Science 281:1959. Science 282:1048-1049.
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251.
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Van Den Bussche, R. A., J. L. Longmire, L. L. Janecek,
and R. J. Baker. 1998. Organization of repetitive DNA
in the primitive reptile Sphenodon punctatus. Occasional
Papers of the Museum of Texas Tech University 178:1-12.
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250.
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Bowers, K. L., M. J. Hamilton, S. M. Witte, and R. J.
Baker. 1998. Origins of heterochromatic repatterning
in white-footed mice, Peromyscus leucopus. Journal
of Mammalogy 79:725-735.
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249.
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Genoways, H. H., C. J. Phillips, and R. J. Baker. 1998.
Bats of the Antillean island of Grenada: a new zoogeographic
perspective. Occasional Papers of the Museum of Texas
Tech University 177:1-18.
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248.
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Kass, D. H., J. A. Peppers, M. Maltbie, and R. J. Baker.
1998. Enrichment of a LINE subfamily to a single chromosomal
region in Peromyscus. Mammalian Genome 9:488-490.
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247.
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Makova, K. D., J. C. Patton, E. Yu. Krysanov, R. K. Chesser,
and R. J. Baker. 1998. Microsatellite markers in wood
mouse and striped field mouse (genus Apodemus).
Molecular Ecology 7:247-255.
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1997
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246.
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Baker, R. J., J. L. Longmire, M. Maltbie, M. J. Hamilton,
and R. A. Van Den Bussche. 1997. DNA synapomorphies for
a variety of taxonomic levels from a cosmid library from
the New World bat Macrotus waterhousii. Systematic
Biology 46:579-589
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245.
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Jones, C., R. S. Hoffmann, D. W. Rice, M. D. Engstrom,
R. D. Bradley, D. J. Schmidly, C. A. Jones, and R. J.
Baker. 1997. Revised checklist of North American mammals
north of Mexico. Occasional Papers of the Museum of Texas
Tech University 173:1-19.
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244.
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Baker, R. J., R. A. Van Den Bussche, A. J. Wright, L.
E. Wiggins, M. J. Hamilton, E. P. Reat, M. H. Smith,
M. D. Lomakin, and R. Chesser. 1997. Retraction. High
levels of genetic change in rodents of Chernobyl. Nature
390:100.
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243.
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Peppers, J.A., L.E. Wiggins, and Robert J. Baker. 1997.
Nature of B chromosomes in the harvest mouse Reithrodontomys
megalotis by fluorescence in situ hybridization
(FISH). Chromosome Research 5:475-479.
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242.
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Arroyo-Cabrales, J., R. A. Van Den Bussche, K. H. Sigler,
R. K. Chesser, and R. J. Baker. 1997. Genic variation
of mainland and island populations of Natalus stramineus (Chiroptera:
Natalidae). Occasional Papers of the Museum of Texas
Tech University 171:1-8.
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241.
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Longmire, J. L., M. Maltbie, and R. J. Baker. 1997. Use
of "lysis buffer" in DNA isolation and its
implication for museum collections. Occasional Papers
of the Museum of Texas Tech University 163:1-3.
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240.
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Baker, R. J. et al. 1997. Natural science database: resource
management and public health. Pp. 10-20 in Organization
of Fish and Wildlife Information Managers 4th Annual
Conference Proceedings. Key Largo, Florida.
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1996
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239.
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Chesser, R.K. and R.J. Baker. 1996. Effective sizes and
dynamics of uniparentally and diparentally inherited
genes. Genetics 144:1225-1235.
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238.
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Genoways, H. H. and R. J. Baker. 1996. A new species
of the genus Rhogeessa, with comments on geographic distribution
and speciation in the genus. Pp. 83-88 in Contributions
in Mammalogy: A Memorial Volume Honoring Dr. J. Knox
Jones, Jr. (H.H. Genoways and R.J. Baker, eds.). The
Museum of Texas Tech University. xxix+1-315.
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237.
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Chesser, R.K., R. D. Bradley, R.A. Van Den Bussche, M.
J. Hamilton, and R.J. Baker. 1996. Maintenance of a narrow
hybrid zone in Geomys: Results from contiguous clustering
analysis. Pp. 35-46 in Contributions in Mammalogy:
A Memorial Volume Honoring Dr. J. Knox Jones, Jr. (H.H.
Genoways and R.J. Baker, eds.). The Museum of Texas Tech
University. xxix+1-315.
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236.
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Baker, R.J., A. D Simmons, M. S. Powell, J.L. Longmire,
and R.D. Bradley. 1996. Utility of a satellite DNA sequence
as a genetic marker in hybrid zone of pocket gophers
(genus Geomys). Pp. 25-34 in Contributions
in Mammalogy: A Memorial Volume Honoring Dr. J. Knox
Jones, Jr. (H.H. Genoways and R.J. Baker, eds.). The
Museum of Texas Tech University. xxix+1-315.
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235.
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Baker, R.J. 1996. Eulogy: The Dedicated Scientist; Encomium.
Pp. xxvi-xxxi in Contributions in Mammalogy:
A Memorial Volume Honoring Dr. J. Knox Jones, Jr. (H.H.
Genoways and R.J. Baker, eds.). The Museum of Texas Tech
University. xxix+1-315.
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234.
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Genoways, H. H., and R. J. Baker (eds.). Contributions
in Mammalogy: A Memorial Volume Honoring Dr. J. Knox
Jones, Jr. The Museum of Texas Tech University.
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233.
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Sugg, D. W., J. W. Bickham, J. A. Brooks, M. D. Lomakin,
C. H. Jagoe, C. E. Dallas, M. H. Smith, R. J. Baker,
and R. K. Chesser. 1996. DNA damage and radiocesium in
channel catfish from Chernobyl. Environmental Toxicology
and Chemistry 15:1057-1063.
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232.
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Cathey, J. C., L. M. Smith, R. J. Baker, J. A. DeWoody.
1996. Trinucleotide repeat polymorphism at the alpha-enolase/tau-crystallin
locus in ducks. Animal Genetics 27:130-131.
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231.
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Findley, J. S., C. Jones, H. H. Genoways, E. C. Birney,
and R. J. Baker. 1996. Obituary of J. Knox Jones, Jr.:
1929-1992. Journal of Mammalogy 77:578-593.
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230.
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Owen, J. G., R. J. Baker, S. L. Williams. 1996. Karyotypic
variation in spotted skunks (Carnivora: Mustelidae: Spilogale).
Texas Journal of Science 48:119-122.
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229.
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Baker, R. J., R. A. Van Den Bussche, A. J. Wright, L.
E. Wiggins, M. J. Hamilton, E. P. Reat, M. H. Smith,
M. D. Lomakin, and R. Chesser. 1996. High levels of genetic
change in rodents of Chernobyl. Nature 380:707-708.
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228.
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Chesser, Ronald et Robert Baker. 1996. La vie sauvage
a Tchernobyl, analyse d'une prospere mais genetiquement
alteree. La Recherche 268:30-31.
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227.
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Lee, R. N., J. C. Jaskula, R. A. Van Den Bussche, R.
J. Baker and H. A. Wichman. 1996. Retrotransposon mys
was active during evolution of the Peromyscus leucopus-maniculatus complex.
Journal of Molecular Evolution 42:44-51.
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226.
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Baker, R.J., M.J. Hamilton, R. A. Van Den Bussche, L.E.
Wiggins, D.W. Sugg, M.H. Smith, M.D. Lomakin, S.P. Gaschak,
E.G. Bundova, G.A. Rudenskaya, and R.K. Chesser. 1996.
Small mammals from the most radioactive sites near the
Chornobyl nuclear power plant. Journal of Mammalogy 77:155-170.
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1995
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225.
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Van Den Bussche, R. A., J. L. Longmire, and R. J. Baker.
1995. How bats achieve a small C-value: frequency of
repetitive DNA in Macrotus. Mammalian Genome 6:521-525.
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224.
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Baker, R. J., J. L. Longmire, and R. A. Van Den Bussche.
1995. Organization of repetitive elements in the upland
cotton (Gossypium hirsutum). Journal of Heredity 86:178-185.
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223.
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Jones, J. K., Jr., R. D Bradley, and R. J. Baker. 1995. Hybrid gophers and some thoughts on the relationship of natural hybrids to the rules of nomenclature and the endangered species act. Journal of Mammalogy 76:43-49.
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1994
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222.
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Greenbaum, I.F. et al. 1994. Cytogenetic nomenclature
of deer mice, Peromyscus (Rodentia): revision
and review of the standardized karyotype. Report of the
Committee for the Standardization of Chromosomes of Peromyscus.
Cytogenetics Cell Genetics 66:181-195.
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221.
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Baker, R. J., and D. H. Kass. 1994. Comparison of chromosomal
distribution of a retroposon (LINE) and a retrovirus-like
element mys in Peromyscus maniculatus and P. leucopus.
Chromosome Research 2:185-189.
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220.
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Baker, R. J., and M. Hafner. 1994. Cytogenetics. Pp.
310-322 in Seventy-Five Years in Mammalogy (E. C. Birney
and J. R. Choate, eds.). Special Publications, American
Society of Mammalogists 11:1-433.
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219.
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Baker, R. J., V. A. Taddei, J. L. Hudgeons, and R. A.
Van Den Bussche. 1994. Systematic relationships within
Chiroderma (Chiroptera: Phyllostomidae) based on cytochrome
B sequence variation. Journal of Mammalogy 75:321-327.
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218.
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Baker, R. J. 1994. Some thoughts on conservation, biodiversity,
museums, molecular characters, systematics and basic
research. Journal of Mammalogy 75:277-287.
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1993
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217.
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Longmire, J. L., M. Maltbie, R. W. Pavelka, L. M.
Smith, S. W. Witte, O. A. Ryder, D. L. Ellsworth,
and R. J. Baker. 1993. Gender identification in birds
using microsatellite DNA fingerprint analysis. Auk
110:378-381.
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216.
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Van Den Bussche, R. A., R. K. Chesser, M. J. Hamilton,
R. D. Bradley, C. A. Porter, and R. J. Baker. 1993.
Maintenance of a narrow hybrid zone in Peromyscus
leucopus: a test of alternative models. Journal of
Mammalogy 74:832-845.
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215.
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Van Den Bussche, R. A., R. J. Baker, H. A. Wichman,
and M. J. Hamilton. 1993. Molecular phylogenetics
of Stenodermatini genera: Congruence of nuclear and
mitochondrial DNA. Molecular and Biological Evolution
10:944-959.
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214.
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Janecek, L. L., J. L. Longmire, H. A. Wichman, and
R. J. Baker. 1993. Genome organization of repetitive
elements in the rodent, Peromyscus leucopus. Mammalian
Genome 4:374-381.
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213.
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Van Den Bussche, R. A. and R. J. Baker. 1993. Molecular
phylogenetics of the New World bat genus Phyllostomus
based on cytochrome B DNA sequence variation. Journal
of Mammalogy 74:793-802.
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1992
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212.
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Van Den Bussche, R. A., R. L. Honeycutt, and
R. J. Baker. 1992. Restriction endonuclease digestion
patterns of harvest mice (Reithrodontomys) chromosomes:
a comparison to G-bands, C-bands and in situ
hybridization. Genetica 87:141-149.
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211.
|
Baker, R. J. 1992. Review of: The Bats of Texas
by David J. Schmidly. Texas A & M Press,
College Station, Texas. The Quarterly Review
of Biology 67:539-540.
|
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210.
|
Simmons, A. D., J. L. Longmire, T. W. Reeder,
H. A. Wichman and R. J. Baker. 1992. Restriction
fragment length polymorphism in satellite DNA
distinguish chromosomal races of the white-footed
mouse Peromyscus leucopus. Molecular Ecology
1:251-254.
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209.
|
Wichman, H. A., R. Van Den Bussche, M. Hamilton,
and R. J. Baker. 1992. Transposable elements
and the evolution of genome organization in mammals.
Genetica 86:287-293.
|
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208.
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Baker, R. J., M. Maltbie, J. G. Owen, M. Hamilton,
and R. D. Bradley. 1992. Reduced number of ribosomal
sites in bats: Evidence for a mechanism to contain
genome size. Journal of Mammalogy 73:847-858.
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207.
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Baker, R. J. 1992. Review: Principles of Systematic Zoology by E. Mayr and P. K. Ashlock. 1991. McGraw-Hill, Inc., New York. Journal of Mammalogy 73:689-699.
|
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206.
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Stangl, F. B., Jr., W. W. Dalquest and R. J.
Baker. 1992. Mammals of Southwestern Oklahoma.
Occasional Papers of the Museum of Texas Tech
University 151:1-49.
|
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205.
|
Ricroch, A., E. B. Peffley and R. J. Baker. 1992.
Chromosomal location of rDNA in Allium: in situ
hybridization using biotin- and fluoroscein-labelled
probe. Theoretical and Applied Genetics 83:413-418.
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204.
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Jones, J. K., Jr., R. S. Hoffmann, D. W. Rice,
C. Jones, R. J. Baker, and M. D. Engstrom. 1992.
Revised Checklist of North American Mammals North
of Mexico. Occasional Papers of the Museum of
Texas Tech University 146:1-23.
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1991
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203.
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Mindell, D. P., C. W. Dick, and R. J. Baker.
1991. Phylogenetic relationships among megabats,
microbats, and primates. Proceeding of the
National Academy of Science, USA 88:10322-10326.
|
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202.
|
Wichman, H. A., C. T. Payne, O. A. Ryder,
M. J. Hamilton, M. Maltbie, and R. J. Baker.
1991. Genomic distribution of heterochromatic
sequences in equids: A molecular model for
rapid chromosomal evolution. Journal of Heredity
82:369-377.
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201.
|
Bradley, R. D., S. F. Lockwood, J. W. Bickham,
and R. J. Baker. 1991. Hybrid breakdown and
cellular DNA content in a contact zone between
two species of pocket gophers (Geomys). Journal
of Mammalogy 72:697-705.
|
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200.
|
Baker, R. J., R. Honeycutt, and R. A. Van
Den Bussche. 1991. Examination of monophyly
of bats: restriction map of the ribosomal
DNA cistron. Pp. 42-53 in Contribution to
Mammalogy In honor of Karl F. Koopman. (T.
Griffiths and D. Klingener, eds.). Bulletin
of the American Museum of Natural History
206:1-432.
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199.
|
Porter, C. A., M. J. Hamilton, J. W. Sites,
Jr., and R. J. Baker. 1991. Location of ribosomal
DNA in chromosomes of Squamate reptiles:
systematic and evolutionary implications.
Herpetologica 47:271-280.
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198.
|
Adkins, R. M., K. McBee, C. A. Porter, and
R. J. Baker. 1991. Hybrid breakdown in Peromyscus
leucopus and examination of the recombinational-breakdown
model. Journal of Mammalogy 72:535-541.
|
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197.
|
Baker, R. J. 1991. Review of: Molecular Systematics.
(D. M. Hillis and C. Moritz, eds.). Sinauer
Associates, Inc., Sunderland, Massachusetts.
Journal of Mammalogy 72:427.
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196.
|
Bradley, R. D., S. K. Davis, and R. J. Baker.
1991. Genetic control of premating-isolating
behavior: Kaneshiro's hypothesis and asymmetrical
sexual selection in pocket gophers. Journal
of Heredity 82:192-196.
|
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195.
|
Simmons, N. S., M. J. Novacek, and R. J.
Baker. 1991. Approaches, methods, the future
of the Chiropteran monophyly controversy:
a reply to J. D. Pettigrew. Systematic Zoology
40:239-243.
|
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194.
|
Baker, R. J., M. J. Novacek, and N. S. Simmons.
1991. On the monophyly of bats. Systematic
Zoology 40:216-231.
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193.
|
Baker, R. J. 1991. Review of: Advances in
Neotropical Mammalogy. (K. H. Redford and
J. F. Eisenberg, eds.). Sandhill Crane Press,
Gainesville, Florida. Systematic Zoology
40:114.
|
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192.
|
Baker, R. J., C. A. Porter, B. G. Hanks,
and J. W. Bickham. 1991. Increased variation in cellular DNA content at a hybrid zone: hybrid breakdown in Peromyscus leucopus. Journal
of Heredity 82:27-30.
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191.
|
Qumsiyeh, M. B., M. J. Hamilton, E. R. Dempster,
and R. J. Baker. 1991. Cytogenetics and systematics
of the rodent genus Gerbillurus. Journal
of Mammalogy 72:89-96.
|
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190.
|
Owen, J. G., J. K. Jones, Jr., and R. J.
Baker. 1991. Annotated checklist of land
mammals of El Salvador. Occasional Papers
of the Museum of Texas Tech University 139:1-17.
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189.
|
Hillis, D. M., C. Moritz, C. A. Porter, and
R. J. Baker. 1991. Evidence for Biased gene
conversion in concerted evolution in ribosomal
DNA. Science 251:308-310.
|
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188.
|
Bradley, R. D., S. K. Davis, J. M. Bayouth,
M. J. Hamilton, M. Maltbie, and R. J. Baker.
1991. Chromosomal distribution of some repetitive
DNA sequences in the Pocket Gopher (Geomys,
Cratogeomys, Thomomys) as determined by in
situ hybridization. Occasional Papers of
the Museum of Texas Tech University 141:1-15.
|
1990
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187.
|
Baker, R. J., and H. A. Wichman. 1990.
Retrotransposon mys is concentrated on
the sex chromosomes: implications for
copy number containment. Evolution 44:2083-2088.
|
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186.
|
Owen, J. G., R. J. Baker, and J. K. Jones,
Jr. 1990. First record of Peromyscus
gymnotis (Muridae) from El Salvador,
with second record for Choeroniscus godmani
and Diaemus youngi (Phyllostomidae).
Texas Journal of Science 42:417-418.
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185.
|
Hamilton, M., R. Honeycutt, and R. J.
Baker. 1990. Intragenomic movement, sequence
amplification and concerted evolution
in satellite DNA in Reithrodontomys:
evidence from in situ hybridization.
Chromosoma 99:321-329.
|
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184.
|
Kerridge, D. C., and R. J. Baker. 1990.
Genetic variation and origin of the most
chromosomally polymorphic natural mammalian
populations. Cytogenetics and Cell Genetics
53:5-7.
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183.
|
Qumsiyeh, M. B., S. W. King, J. Arroyo-Cabrales,
I. R. Aggundey, D. A. Schlitter, R. J.
Baker, and K. J. Marrow, Jr. 1990. Chromosomal
and protein evolution in the morphologically
similar species of murid rodents of the
Praomys complex. Journal of Heredity
81:58-65.
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182.
|
Meyne, J., R. J. Baker, H. H. Hobart,
T. C. Hsu, O. A. Ryder, O. G. Ward, J.
E. Wiley, D. H. Wurster-Hill, T. L. Yates,
and R. K. Moyzis. 1990. Distribution
of non-telomeric sites of the (TTAGGG)n
telomeric sequence in vertebrate chromosomes.
Chromosoma 99:3-10.
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